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  5. LOC_Os09g23780.1

LOC_Os09g23780.1


Description : Uncharacterized protein At1g66480 OS=Arabidopsis thaliana (sp|q6nlc8|y1648_arath : 91.7)


Gene families : OG0003357 (Archaeplastida) Phylogenetic Tree(s): OG0003357_tree ,
OG_05_0002302 (LandPlants) Phylogenetic Tree(s): OG_05_0002302_tree ,
OG_06_0001446 (SeedPlants) Phylogenetic Tree(s): OG_06_0001446_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g23780.1
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00035620 evm_27.TU.AmTr_v1... Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G71015 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 Archaeplastida
GSVIVT01011766001 No alias Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030865001 No alias Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os06g14780.1 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 Archaeplastida
MA_10431168g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g008210.4.1 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e015734_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034082_P002 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e036745_P001 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0004126 cytidine deaminase activity IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006216 cytidine catabolic process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009972 cytidine deamination IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046087 cytidine metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Neighborhood
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 166
No external refs found!