LOC_Os09g24560.1

Description : transcription factor (NAC)

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0000025 (SeedPlants) Phylogenetic Tree(s): OG_06_0000025_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g24560.1
Cluster	HCCA: Cluster_278

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00255350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00037p00144010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00044p00058960	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00058p00136280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00119p00026870	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00119p00040230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.02	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.04	Archaeplastida
AT1G54330	ANAC020, NAC020	NAC domain containing protein 20	0.03	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.02	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.03	Archaeplastida
AT1G69490	ATNAP, NAP, ANAC029	NAC-like, activated by AP3/PI	0.03	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.02	Archaeplastida
AT1G76420	ANAC031, NAC368, CUC3	NAC (No Apical Meristem) domain transcriptional...	0.07	Archaeplastida
AT2G18060	VND1, ANAC037	vascular related NAC-domain protein 1	0.04	Archaeplastida
AT3G15170	ANAC054, ATNAC1, CUC1	NAC (No Apical Meristem) domain transcriptional...	0.08	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.03	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.02	Archaeplastida
AT5G08790	anac081, ATAF2	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
AT5G24590	ANAC091, TIP	No description available	0.04	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.03	Archaeplastida
AT5G53950	ATCUC2, ANAC098, CUC2	NAC (No Apical Meristem) domain transcriptional...	0.08	Archaeplastida
GSVIVT01001264001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01007982001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01013419001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.09	Archaeplastida
GSVIVT01014287001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01016176001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01022354001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01023123001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01034485001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
Gb_07132	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_12202	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_18916	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_40805	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os01g60020.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os02g15340.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os02g41450.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os06g33940.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os08g02160.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
MA_10436448g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_122815g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_138461g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_21732g0010	No alias	transcription factor (NAC)	0.05	Archaeplastida
MA_23113g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_5017g0010	No alias	transcription factor (NAC)	0.05	Archaeplastida
MA_73369g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g02620.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Pp3c13_10800V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c26_13950V3.1	No alias	NAC 007	0.02	Archaeplastida
Pp3c8_6080V3.1	No alias	NAC domain containing protein 2	0.02	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc05g007550.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g060230.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g065410.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g073050.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.09	Archaeplastida
Solyc08g079120.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc10g006880.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc11g017470.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc12g013620.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.09	Archaeplastida
Zm00001e014291_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e015816_P003	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.11	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e035277_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e037088_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e037804_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e038267_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e040938_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	Neighborhood
MF	GO:0003678	DNA helicase activity	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0010274	hydrotropism	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0032200	telomere organization	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0060249	anatomical structure homeostasis	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	32	171

External Links

No external refs found!

LOC_Os09g24560.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation