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  5. LOC_Os09g24640.1

LOC_Os09g24640.1


Description : Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana (sp|q9zqa1|pp188_arath : 386.0)


Gene families : OG0014033 (Archaeplastida) Phylogenetic Tree(s): OG0014033_tree ,
OG_05_0000789 (LandPlants) Phylogenetic Tree(s): OG_05_0000789_tree ,
OG_06_0000692 (SeedPlants) Phylogenetic Tree(s): OG_06_0000692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g24640.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Solyc04g063270.2.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e013232_P001 No alias Pentatricopeptide repeat-containing protein At2g36730... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 146 171
IPR002885 Pentatricopeptide_repeat 347 371
IPR002885 Pentatricopeptide_repeat 273 319
IPR002885 Pentatricopeptide_repeat 172 217
No external refs found!