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  5. LOC_Os09g24800.1

LOC_Os09g24800.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000815 (SeedPlants) Phylogenetic Tree(s): OG_06_0000815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g24800.1
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.02 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.04 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.02 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.03 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.04 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.02 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.03 Archaeplastida
AT2G13960 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G31180 ATMYB14, MYB14, MYB14AT myb domain protein 14 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.02 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.04 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.04 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.04 Archaeplastida
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.09 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.03 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.04 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.06 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.04 Archaeplastida
AT3G50060 MYB77 myb domain protein 77 0.03 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.03 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.03 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.04 Archaeplastida
AT4G28110 MYB41, AtMYB41 myb domain protein 41 0.04 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.03 Archaeplastida
AT5G23000 MYB37, RAX1, ATMYB37 myb domain protein 37 0.03 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.02 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.04 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.03 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.03 Archaeplastida
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.03 Archaeplastida
Cpa|evm.model.tig00000663.2 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Cpa|evm.model.tig00021108.38 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Cre16.g677382 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01000232001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01007731001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011417001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013735001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016768001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01018234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01018745001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01019945001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026481001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01028984001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01029941001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01030866001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01031496001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035041001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01035462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_05115 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_06298 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_11536 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_20309 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_24641 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_27374 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_32143 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_33428 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g16810.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g01960.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os09g36730.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10425867g0020 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_139924g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_14452g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_2797g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_30848g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_308669g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_34517g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_37851g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_55123g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_6277697g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_64405g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_82197g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_9381481g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9483804g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_95226g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp3g23170.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.06 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Smo84195 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Solyc01g005660.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc01g009650.1.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g093930.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc04g014470.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc04g079360.1.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007160.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g009230.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.11 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g055030.2.1 No alias transcription factor (MYB) 0.1 Archaeplastida
Solyc06g005310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g069850.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g075660.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g008010.4.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc07g053240.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g005870.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g082890.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc09g090130.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005240.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.03 Archaeplastida
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g049300.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g049350.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004128_P003 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e005044_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e010251_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e011862_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e012681_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e019501_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024606_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e034807_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!