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  5. LOC_Os09g25000.1

LOC_Os09g25000.1


Description : U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica (sp|q5vrh9|pub12_orysj : 93.6)


Gene families : OG0002933 (Archaeplastida) Phylogenetic Tree(s): OG0002933_tree ,
OG_05_0002297 (LandPlants) Phylogenetic Tree(s): OG_05_0002297_tree ,
OG_06_0001987 (SeedPlants) Phylogenetic Tree(s): OG_06_0001987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g25000.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00179210 evm_27.TU.AmTr_v1... U-box domain-containing protein 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_21721 No alias U-box domain-containing protein 3 OS=Arabidopsis... 0.02 Archaeplastida
MA_185953g0010 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.02 Archaeplastida
Mp7g17690.1 No alias U-box domain-containing protein 2 OS=Arabidopsis... 0.04 Archaeplastida
Smo402458 No alias No description available 0.03 Archaeplastida
Solyc08g042100.3.1 No alias U-box domain-containing protein 3 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e034144_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!