LOC_Os09g25100.1

Description : SNF1-related protein kinase (SnRK3)

Gene families : OG0000072 (Archaeplastida) Phylogenetic Tree(s): OG0000072_tree ,
OG_05_0000211 (LandPlants) Phylogenetic Tree(s): OG_05_0000211_tree ,
OG_06_0000077 (SeedPlants) Phylogenetic Tree(s): OG_06_0000077_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g25100.1
Cluster	HCCA: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00220190	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CAMK kinase...	0.02	Archaeplastida
AMTR_s00065p00195610	No alias	Protein modification.phosphorylation.CAMK kinase...	0.02	Archaeplastida
AMTR_s00130p00110630	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CAMK kinase...	0.02	Archaeplastida
AT1G48260	CIPK17, SnRK3.21	CBL-interacting protein kinase 17	0.04	Archaeplastida
AT2G26980	CIPK3, SnRK3.17	CBL-interacting protein kinase 3	0.02	Archaeplastida
AT5G57630	CIPK21, SnRK3.4	CBL-interacting protein kinase 21	0.02	Archaeplastida
AT5G58380	PKS2, CIPK10,...	SOS3-interacting protein 1	0.01	Archaeplastida
Cpa\|evm.model.tig00020960.6	No alias	Enzyme classification.EC_2 transferases.EC_2.7...	0.01	Archaeplastida
Gb_28009	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
Gb_28012	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
LOC_Os08g19410.1	No alias	CBL-interacting protein kinase 25 OS=Oryza sativa subsp....	0.04	Archaeplastida
LOC_Os08g34240.1	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
LOC_Os09g25090.1	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
MA_10430548g0010	No alias	SNF1-related protein kinase (SnRK3)	0.01	Archaeplastida
MA_10430548g0020	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
MA_11732g0010	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
MA_139797g0010	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
MA_70100g0010	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
MA_86597g0010	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Smo79434	No alias	Protein modification.phosphorylation.CAMK kinase...	0.02	Archaeplastida
Solyc03g006110.3.1	No alias	No annotation	0.03	Archaeplastida
Solyc09g018280.1.1	No alias	SNF1-related protein kinase (SnRK3)	0.04	Archaeplastida
Solyc09g042660.4.1	No alias	SNF1-related protein kinase (SnRK3)	0.04	Archaeplastida
Solyc12g098910.2.1	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
Zm00001e018059_P001	No alias	CBL-interacting protein kinase 4 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e022467_P001	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
Zm00001e030580_P001	No alias	SNF1-related protein kinase (SnRK3). protein kinase (SOS2)	0.03	Archaeplastida
Zm00001e034152_P002	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
Zm00001e035912_P001	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Zm00001e037422_P004	No alias	SNF1-related protein kinase (SnRK3). protein kinase (SOS2)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	Neighborhood
MF	GO:0003678	DNA helicase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
MF	GO:0008483	transaminase activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0019321	pentose metabolic process	IEP	Neighborhood
BP	GO:0019566	arabinose metabolic process	IEP	Neighborhood
BP	GO:0032200	telomere organization	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
BP	GO:0046373	L-arabinose metabolic process	IEP	Neighborhood
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0060249	anatomical structure homeostasis	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004041	NAF_dom	299	358
IPR000719	Prot_kinase_dom	11	266

External Links

No external refs found!

LOC_Os09g25100.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation