LOC_Os09g25290.1

Description : no hits & (original description: none)

Gene families : OG0001195 (Archaeplastida) Phylogenetic Tree(s): OG0001195_tree ,
OG_05_0000753 (LandPlants) Phylogenetic Tree(s): OG_05_0000753_tree ,
OG_06_0001015 (SeedPlants) Phylogenetic Tree(s): OG_06_0001015_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g25290.1
Cluster	HCCA: Cluster_195

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00251960	evm_27.TU.AmTr_v1...	No description available	0.06	Archaeplastida
AT1G13635	No alias	DNA glycosylase superfamily protein	0.05	Archaeplastida
AT3G12710	No alias	DNA glycosylase superfamily protein	0.03	Archaeplastida
AT5G44680	No alias	DNA glycosylase superfamily protein	0.02	Archaeplastida
GSVIVT01010109001	No alias	No description available	0.08	Archaeplastida
Gb_30956	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os01g58550.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os08g38170.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_114043g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc02g082120.3.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc05g010800.3.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e003412_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e009836_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e019556_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e028917_P002	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e034160_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e041165_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003905	alkylbase DNA N-glycosylase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006284	base-excision repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
MF	GO:0019104	DNA N-glycosylase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043733	DNA-3-methylbase glycosylase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Neighborhood
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005019	Adenine_glyco	177	350

External Links

No external refs found!

LOC_Os09g25290.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation