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  5. AMTR_s00010p00060450

AMTR_s00010p00060450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.33

No description available


Gene families : OG0003088 (Archaeplastida) Phylogenetic Tree(s): OG0003088_tree ,
OG_05_0002090 (LandPlants) Phylogenetic Tree(s): OG_05_0002090_tree ,
OG_06_0001507 (SeedPlants) Phylogenetic Tree(s): OG_06_0001507_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00060450
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT1G29195 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 Archaeplastida
AT2G30230 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 Archaeplastida
LOC_Os01g55370.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g18660.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g007370.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029016_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 192
No external refs found!