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  5. LOC_Os09g26730.1

LOC_Os09g26730.1


Description : CPN20 auxiliary co-chaperone involved in RuBisCo assembly. Hsp60-co-chaperone (Hsp20)


Gene families : OG0002206 (Archaeplastida) Phylogenetic Tree(s): OG0002206_tree ,
OG_05_0002586 (LandPlants) Phylogenetic Tree(s): OG_05_0002586_tree ,
OG_06_0003596 (SeedPlants) Phylogenetic Tree(s): OG_06_0003596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g26730.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT5G20720 CPN21, ATCPN21,... chaperonin 20 0.05 Archaeplastida
Cre08.g358562 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre12.g505850 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01015036001 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Pp3c22_7570V3.1 No alias chaperonin 20 0.14 Archaeplastida
Pp3c22_7600V3.1 No alias chaperonin 20 0.09 Archaeplastida
Smo270691 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Solyc07g042250.3.1 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.08 Archaeplastida
Zm00001e023757_P002 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 153 243
IPR020818 Chaperonin_GroES 55 144
No external refs found!