LOC_Os09g28400.1


Description : alpha amylase


Gene families : OG0000584 (Archaeplastida) Phylogenetic Tree(s): OG0000584_tree ,
OG_05_0001382 (LandPlants) Phylogenetic Tree(s): OG_05_0001382_tree ,
OG_06_0002339 (SeedPlants) Phylogenetic Tree(s): OG_06_0002339_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g28400.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Gb_04800 No alias alpha amylase 0.02 Archaeplastida
Gb_04803 No alias alpha amylase 0.03 Archaeplastida
Gb_30448 No alias alpha amylase 0.02 Archaeplastida
LOC_Os02g52700.1 No alias alpha amylase 0.06 Archaeplastida
LOC_Os09g28420.1 No alias alpha amylase 0.06 Archaeplastida
Zm00001e009946_P001 No alias alpha amylase 0.04 Archaeplastida
Zm00001e015947_P002 No alias alpha amylase 0.04 Archaeplastida
Zm00001e034027_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e034028_P002 No alias alpha amylase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 58 348
IPR012850 A-amylase_bs_C 369 427
No external refs found!