LOC_Os09g29360.1


Description : transcription factor (bHLH)


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0000646 (SeedPlants) Phylogenetic Tree(s): OG_06_0000646_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g29360.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00089p00043950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G61950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01000012001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01003437001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01017892001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01021074001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_17233 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_21105 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_686524g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
Solyc01g080050.4.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc03g007410.4.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc04g074810.4.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc05g053660.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc09g091760.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc11g010340.2.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e009989_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e014279_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e015494_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015903_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e023838_P003 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e024824_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e026643_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e034422_P002 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e038836_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e041403_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 132 183
No external refs found!