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  5. LOC_Os09g29960.1

LOC_Os09g29960.1


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g29960.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021085001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_20130 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_248613g0010 No alias No annotation 0.04 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.01 Archaeplastida
Pp3c17_3860V3.1 No alias OBF binding protein 4 0.01 Archaeplastida
Pp3c4_850V3.1 No alias cycling DOF factor 3 0.04 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.01 Archaeplastida
Solyc04g070960.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc06g062520.1.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc11g072500.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e005107_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e009303_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e010022_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e020190_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e034454_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e041944_P001 No alias transcription factor (DOF) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 43 96
No external refs found!