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  5. LOC_Os09g30010.1

LOC_Os09g30010.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000381 (Archaeplastida) Phylogenetic Tree(s): OG0000381_tree ,
OG_05_0000190 (LandPlants) Phylogenetic Tree(s): OG_05_0000190_tree ,
OG_06_0009173 (SeedPlants) Phylogenetic Tree(s): OG_06_0009173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g30010.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00195790 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT2G45470 AGP8, FLA8 FASCICLIN-like arabinogalactan protein 8 0.03 Archaeplastida
AT4G12730 FLA2 FASCICLIN-like arabinogalactan 2 0.04 Archaeplastida
GSVIVT01014684001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Gb_05461 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Gb_12627 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Gb_27317 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Archaeplastida
LOC_Os08g38270.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
MA_137299g0010 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Archaeplastida
MA_16264g0020 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Archaeplastida
Mp5g05430.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Mp5g05440.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Mp5g05460.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Pp3c4_16840V3.1 No alias FASCICLIN-like arabinogalactan protein 8 0.01 Archaeplastida
Smo55113 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Solyc07g065540.1.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc12g006110.3.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc12g015690.3.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e019325_P001 No alias fasciclin-type arabinogalactan protein. regulatory... 0.01 Archaeplastida
Zm00001e023434_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e034458_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e036843_P001 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 56 188
No external refs found!