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  5. AMTR_s00010p00117910

AMTR_s00010p00117910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.72

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000097 (Archaeplastida) Phylogenetic Tree(s): OG0000097_tree ,
OG_05_0000048 (LandPlants) Phylogenetic Tree(s): OG_05_0000048_tree ,
OG_06_0000021 (SeedPlants) Phylogenetic Tree(s): OG_06_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00117910
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00230750 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00236250 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.06 Archaeplastida
AMTR_s00084p00087230 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s00126p00036100 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s01360p00009540 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
Gb_00751 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.05 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.05 Archaeplastida
Gb_26176 No alias transcription factor (mTERF) 0.05 Archaeplastida
LOC_Os02g51450.2 No alias transcription factor (mTERF) 0.05 Archaeplastida
LOC_Os05g33440.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os05g33460.2 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12110.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os07g24090.1 No alias transcription factor (mTERF) 0.06 Archaeplastida
LOC_Os11g14130.1 No alias transcription factor (mTERF) 0.08 Archaeplastida
MA_192398g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_31885g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_86824g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_92135g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
Pp3c4_13990V3.1 No alias Mitochondrial transcription termination factor family protein 0.03 Archaeplastida
Solyc02g082010.3.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Solyc04g011700.2.1 No alias transcription factor (mTERF) 0.05 Archaeplastida
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.06 Archaeplastida
Zm00001e010589_P001 No alias transcription factor (mTERF) 0.05 Archaeplastida
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.04 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
InterPro domains Description Start Stop
IPR003690 MTERF 102 196
No external refs found!