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  5. LOC_Os09g31450.1

LOC_Os09g31450.1


Description : pathogen polygalacturonase inhibitor (PGIP)


Gene families : OG0004064 (Archaeplastida) Phylogenetic Tree(s): OG0004064_tree ,
OG_05_0002955 (LandPlants) Phylogenetic Tree(s): OG_05_0002955_tree ,
OG_06_0001891 (SeedPlants) Phylogenetic Tree(s): OG_06_0001891_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g31450.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00219620 evm_27.TU.AmTr_v1... Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT3G12145 FLR1, FLOR1 Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT5G06860 ATPGIP1, PGIP1 polygalacturonase inhibiting protein 1 0.04 Archaeplastida
GSVIVT01032973001 No alias LRR receptor-like serine/threonine-protein kinase RPK2... 0.04 Archaeplastida
LOC_Os03g32180.1 No alias Polygalacturonase inhibitor OS=Pyrus communis... 0.02 Archaeplastida
LOC_Os05g01380.1 No alias pathogen polygalacturonase inhibitor (PGIP) 0.02 Archaeplastida
LOC_Os05g01444.1 No alias pathogen polygalacturonase inhibitor (PGIP) 0.02 Archaeplastida
LOC_Os07g38130.1 No alias pathogen polygalacturonase inhibitor (PGIP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 153 213
IPR013210 LRR_N_plant-typ 36 68
IPR001611 Leu-rich_rpt 270 289
IPR001611 Leu-rich_rpt 294 310
No external refs found!