AMTR_s00010p00140120 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.100

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0015284 (LandPlants) Phylogenetic Tree(s): OG_05_0015284_tree ,
OG_06_0014973 (SeedPlants) Phylogenetic Tree(s): OG_06_0014973_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00010p00140120
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00178550	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00019p00179820	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.06	Archaeplastida
AMTR_s00019p00180640	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.06	Archaeplastida
AMTR_s00019p00182440	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00019p00182630	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00019p00184790	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
AMTR_s00019p00186040	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00021p00176450	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00130p00078370	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AT2G24710	GLR2.3, ATGLR2.3	glutamate receptor 2.3	0.03	Archaeplastida
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.06	Archaeplastida
AT2G29100	ATGLR2.9, GLR2.9	glutamate receptor 2.9	0.03	Archaeplastida
AT2G29110	GLR2.8, ATGLR2.8	glutamate receptor 2.8	0.04	Archaeplastida
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.06	Archaeplastida
AT2G32400	GLR3.7, ATGLR3.7, GLR5	glutamate receptor 5	0.02	Archaeplastida
AT3G04110	ATGLR1.1, GLR1.1, GLR1	glutamate receptor 1.1	0.04	Archaeplastida
AT4G31710	GLR2.4, ATGLR2.4	glutamate receptor 2.4	0.03	Archaeplastida
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.05	Archaeplastida
AT5G11210	GLR2.5, ATGLR2.5	glutamate receptor 2.5	0.05	Archaeplastida
AT5G27100	GLR2.1, ATGLR2.1	glutamate receptor 2.1	0.04	Archaeplastida
AT5G48400	ATGLR1.2, GLR1.2	Glutamate receptor family protein	0.03	Archaeplastida
AT5G48410	ATGLR1.3, GLR1.3	glutamate receptor 1.3	0.03	Archaeplastida
GSVIVT01021155001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01021161001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01033121001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.01	Archaeplastida
GSVIVT01033129001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01033137001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
GSVIVT01033142001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
GSVIVT01033160001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
Gb_20613	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Gb_26917	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Gb_27767	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Gb_28362	No alias	ligand-gated cation channel (GLR)	0.05	Archaeplastida
Gb_28364	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Gb_39753	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
LOC_Os02g54640.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
LOC_Os09g26144.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
MA_10226232g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_10428186g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_10428521g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_46902g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_6222576g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_7872524g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_9796468g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_9896648g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc02g077290.2.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Solyc04g078860.4.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc05g045650.4.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc06g063180.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc06g063190.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc06g063200.2.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Solyc06g063210.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc07g052400.3.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Solyc08g006500.4.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Zm00001e009847_P001	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	IEA	Interproscan
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
MF	GO:0005231	excitatory extracellular ligand-gated ion channel activity	None	Extended
MF	GO:0005234	extracellularly glutamate-gated ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	IEA	Interproscan
MF	GO:0008066	glutamate receptor activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0030288	outer membrane-bounded periplasmic space	IEA	Interproscan
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
CC	GO:0042597	periplasmic space	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006835	dicarboxylic acid transport	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015740	C4-dicarboxylate transport	IEP	Neighborhood
BP	GO:0015743	malate transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001828	ANF_lig-bd_rcpt	58	397
IPR001320	Iontro_rcpt	595	844
IPR001638	Solute-binding_3/MltF_N	500	812

External Links

No external refs found!

AMTR_s00010p00140120 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation