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  5. LOC_Os09g35880.1

LOC_Os09g35880.1


Description : transcription factor (BBX-DBB)


Gene families : OG0000461 (Archaeplastida) Phylogenetic Tree(s): OG0000461_tree ,
OG_05_0004244 (LandPlants) Phylogenetic Tree(s): OG_05_0004244_tree ,
OG_06_0005339 (SeedPlants) Phylogenetic Tree(s): OG_06_0005339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g35880.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
AT1G06040 STO B-box zinc finger family protein 0.06 Archaeplastida
AT2G21320 No alias B-box zinc finger family protein 0.08 Archaeplastida
AT2G31380 STH salt tolerance homologue 0.09 Archaeplastida
AT4G38960 No alias B-box type zinc finger family protein 0.02 Archaeplastida
AT4G39070 No alias B-box zinc finger family protein 0.03 Archaeplastida
GSVIVT01018818001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01024173001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.08 Archaeplastida
Pp3c17_14230V3.1 No alias light-regulated zinc finger protein 1 0.04 Archaeplastida
Pp3c7_5280V3.1 No alias B-box type zinc finger family protein 0.1 Archaeplastida
Smo271535 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc01g110370.4.1 No alias transcription factor (BBX-DBB) 0.13 Archaeplastida
Solyc06g073180.3.1 No alias transcription factor (BBX-DBB) 0.1 Archaeplastida
Zm00001e007720_P001 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida
Zm00001e010221_P001 No alias transcription factor (BBX-DBB) 0.05 Archaeplastida
Zm00001e015053_P001 No alias No annotation 0.06 Archaeplastida
Zm00001e022915_P001 No alias transcription factor (BBX-DBB) 0.08 Archaeplastida
Zm00001e026940_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031265_P001 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida
Zm00001e034791_P001 No alias transcription factor (BBX-DBB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000315 Znf_B-box 52 91
IPR000315 Znf_B-box 3 42
No external refs found!