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  5. LOC_Os09g38300.1

LOC_Os09g38300.1


Description : F-box/kelch-repeat protein At5g42350 OS=Arabidopsis thaliana (sp|q9fii2|fk117_arath : 243.0)


Gene families : OG0007939 (Archaeplastida) Phylogenetic Tree(s): OG0007939_tree ,
OG_05_0006314 (LandPlants) Phylogenetic Tree(s): OG_05_0006314_tree ,
OG_06_0007576 (SeedPlants) Phylogenetic Tree(s): OG_06_0007576_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g38300.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Gb_16521 No alias F-box/kelch-repeat protein At5g42350 OS=Arabidopsis... 0.04 Archaeplastida
Mp8g04650.1 No alias F-box/kelch-repeat protein At5g42350 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e034904_P001 No alias F-box/kelch-repeat protein At5g42350 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
InterPro domains Description Start Stop
IPR006652 Kelch_1 227 277
IPR001810 F-box_dom 131 166
No external refs found!