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  5. LOC_Os09g38755.1

LOC_Os09g38755.1


Description : RUG3 mitochondrial RNA splicing factor


Gene families : OG0004747 (Archaeplastida) Phylogenetic Tree(s): OG0004747_tree ,
OG_05_0004128 (LandPlants) Phylogenetic Tree(s): OG_05_0004128_tree ,
OG_06_0004157 (SeedPlants) Phylogenetic Tree(s): OG_06_0004157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g38755.1
Cluster HCCA: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
Mp2g12990.1 No alias RUG3 mitochondrial RNA splicing factor 0.03 Archaeplastida
Pp3c10_6070V3.1 No alias Regulator of chromosome condensation (RCC1) family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 108 155
IPR000408 Reg_chr_condens 158 207
IPR000408 Reg_chr_condens 320 369
IPR000408 Reg_chr_condens 210 265
IPR000408 Reg_chr_condens 35 64
IPR000408 Reg_chr_condens 372 429
IPR000408 Reg_chr_condens 268 317
No external refs found!