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  5. LOC_Os09g39200.1

LOC_Os09g39200.1


Description : plant-specific RAB5 effector (PUF2)


Gene families : OG0004107 (Archaeplastida) Phylogenetic Tree(s): OG0004107_tree ,
OG_05_0003162 (LandPlants) Phylogenetic Tree(s): OG_05_0003162_tree ,
OG_06_0002935 (SeedPlants) Phylogenetic Tree(s): OG_06_0002935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g39200.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Zm00001e009501_P001 No alias plant-specific RAB5 effector (PUF2) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!