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  5. LOC_Os09g39750.1

LOC_Os09g39750.1


Description : no hits & (original description: none)


Gene families : OG0001036 (Archaeplastida) Phylogenetic Tree(s): OG0001036_tree ,
OG_05_0000624 (LandPlants) Phylogenetic Tree(s): OG_05_0000624_tree ,
OG_06_0070069 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g39750.1
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AT5G59790 No alias Domain of unknown function (DUF966) 0.02 Archaeplastida
GSVIVT01006373001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016603001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.09 Archaeplastida
Zm00001e000820_P002 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e028781_P001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e033556_P002 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR010369 DUF966 38 428
No external refs found!