LOC_Os09g39850.1


Description : transcription factor (ERF)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000066 (SeedPlants) Phylogenetic Tree(s): OG_06_0000066_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g39850.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00021p00184450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00040p00195730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00056p00064760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00077p00141890 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00148p00084540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.04 Archaeplastida
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G13330 Rap2.6L related to AP2 6l 0.04 Archaeplastida
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.02 Archaeplastida
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013905001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013913001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013916001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013935001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01018270001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01034563001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01036201001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_03782 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_07474 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_07475 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_07992 No alias Ethylene-responsive transcription factor RAP2-9... 0.03 Archaeplastida
Gb_08031 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_17207 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_23321 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_26067 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_32806 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_34846 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_35474 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46410.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os05g49700.1 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_10266433g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_115502g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_116185g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_184464g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_5979847g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_67585g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_7850076g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7960347g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_844983g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c1_27440V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_28370V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c9_2020V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Solyc01g009440.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc01g091760.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Solyc02g077370.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc02g090770.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g093610.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g124110.2.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 Archaeplastida
Solyc04g007170.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc06g054630.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc06g082590.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc08g007820.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc08g007830.1.1 No alias Dehydration-responsive element-binding protein 1F... 0.03 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc09g075420.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc09g089920.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc09g089930.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g050970.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g076380.2.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc11g011750.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc12g042210.2.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e000400_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e002358_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e003707_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006604_P001 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e006753_P003 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e014659_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015312_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e019159_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e019837_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021331_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.05 Archaeplastida
Zm00001e024669_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e030090_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e031895_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e041781_P001 No alias transcription factor (DREB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 66 114
No external refs found!