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  5. LOC_Os10g02600.1

LOC_Os10g02600.1


Description : no hits & (original description: none)


Gene families : OG0003895 (Archaeplastida) Phylogenetic Tree(s): OG0003895_tree ,
OG_05_0002699 (LandPlants) Phylogenetic Tree(s): OG_05_0002699_tree ,
OG_06_0001553 (SeedPlants) Phylogenetic Tree(s): OG_06_0001553_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g02600.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.15 No alias no hits & (original description: none) 0.05 Archaeplastida
ChrSy.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.05 Archaeplastida
ChrUn.fgenesh.mRNA.31 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
LOC_Os01g29880.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g29280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g53090.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g19830.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g01360.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g15250.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g30300.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g26960.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g12400.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g30790.1 No alias Ent-sandaracopimara-8(14),15-diene synthase OS=Oryza... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!