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  5. LOC_Os10g07510.1

LOC_Os10g07510.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000938 (Archaeplastida) Phylogenetic Tree(s): OG0000938_tree ,
OG_05_0000559 (LandPlants) Phylogenetic Tree(s): OG_05_0000559_tree ,
OG_06_0000336 (SeedPlants) Phylogenetic Tree(s): OG_06_0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g07510.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AT2G42440 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
AT3G03760 LBD20 LOB domain-containing protein 20 0.05 Archaeplastida
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
GSVIVT01029979001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_14010 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Gb_39343 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
LOC_Os03g05500.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_126761g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc01g091420.2.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Zm00001e000390_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e000391_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e001031_P001 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida
Zm00001e019686_P001 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
Zm00001e038582_P001 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Zm00001e042347_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e042443_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e042444_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e042448_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 33 131
No external refs found!