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  5. AMTR_s00010p00201640

AMTR_s00010p00201640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.192

No description available


Gene families : OG0001254 (Archaeplastida) Phylogenetic Tree(s): OG0001254_tree ,
OG_05_0000785 (LandPlants) Phylogenetic Tree(s): OG_05_0000785_tree ,
OG_06_0001179 (SeedPlants) Phylogenetic Tree(s): OG_06_0001179_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00201640
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Pp3c2_32790V3.1 No alias No annotation 0.03 Archaeplastida
Smo404183 No alias No description available 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0030674 protein binding, bridging IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 214 483
No external refs found!