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  5. LOC_Os10g11230.1

LOC_Os10g11230.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g11230.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g71910.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g49290.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g31910.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os04g12390.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g20460.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g28650.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g34850.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g40240.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g14560.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g29820.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g40400.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g04870.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g03040.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g12170.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g12780.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g30090.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g05240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g24680.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g28350.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g33060.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
LOC_Os12g33620.1 No alias no hits & (original description: none) 0.13 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 804 917
No external refs found!