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  5. LOC_Os10g17230.1

LOC_Os10g17230.1


Description : no hits & (original description: none)


Gene families : OG0000098 (Archaeplastida) Phylogenetic Tree(s): OG0000098_tree ,
OG_05_0000033 (LandPlants) Phylogenetic Tree(s): OG_05_0000033_tree ,
OG_06_0000010 (SeedPlants) Phylogenetic Tree(s): OG_06_0000010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g17230.1
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g15190.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g19660.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g29370.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g35470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g41500.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g66450.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g20070.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g25140.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g25440.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g27630.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g33260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g35280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g04790.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g29660.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g31640.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g36470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g52550.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g01190.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g03950.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g05680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g14870.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g17720.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g19910.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g24390.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g28900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g43480.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g04430.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g18910.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g20370.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g20820.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g28560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g32040.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g41860.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g22790.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g23080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g25630.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g29060.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g47370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g48460.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g14970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g18200.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g44520.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g10180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g12400.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g13500.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g13560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g19460.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g33250.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g04540.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g07250.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g07690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g09250.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g10080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g11030.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g14740.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g15140.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g11930.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g26930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g31600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g40160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g22020.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g22690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g22710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g23090.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g28720.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g28790.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g33060.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g35690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g05500.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g14270.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g16820.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g18030.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g20350.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g23010.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g28200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g28280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g28340.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g43280.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!