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  5. LOC_Os10g19860.1

LOC_Os10g19860.1


Description : class XI myosin microfilament-based motor protein


Gene families : OG0000144 (Archaeplastida) Phylogenetic Tree(s): OG0000144_tree ,
OG_05_0030861 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0000342 (SeedPlants) Phylogenetic Tree(s): OG_06_0000342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g19860.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00027850 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.myosin... 0.05 Archaeplastida
AT1G17580 ATMYA1, XI-1, MYA1 myosin 1 0.04 Archaeplastida
AT4G28710 XIH, ATXIH Myosin family protein with Dil domain 0.04 Archaeplastida
AT4G33200 XI-15, ATXI-I, XI-I myosin, putative 0.03 Archaeplastida
AT5G43900 XI-6, ATMYA2, XI-2, MYA2 myosin 2 0.02 Archaeplastida
Cpa|evm.model.tig00000056.26 No alias Myosin-13 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00000113.17 No alias Myosin-12 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00020553.108 No alias Myosin-7 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00020614.59 No alias Myosin-5 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00021108.13 No alias Myosin-9 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01035479001 No alias Cytoskeleton.microfilament network.myosin... 0.03 Archaeplastida
Gb_06648 No alias Myosin-17 OS=Arabidopsis thaliana (sp|f4k5j1|myo17_arath... 0.02 Archaeplastida
Gb_06922 No alias Myosin-1 OS=Arabidopsis thaliana (sp|q9lhe9|myo1_arath : 187.0) 0.04 Archaeplastida
LOC_Os07g37560.1 No alias class VIII myosin microfilament-based motor protein 0.03 Archaeplastida
MA_185797g0010 No alias Myosin-1 OS=Arabidopsis thaliana (sp|q9lhe9|myo1_arath : 394.0) 0.02 Archaeplastida
Pp3c15_13490V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
Pp3c19_9660V3.1 No alias myosin 1 0.03 Archaeplastida
Pp3c9_25390V3.1 No alias Myosin family protein with Dil domain 0.04 Archaeplastida
Solyc07g041150.4.1 No alias class XI myosin microfilament-based motor protein 0.08 Archaeplastida
Solyc08g061500.3.1 No alias class XI myosin microfilament-based motor protein 0.07 Archaeplastida
Solyc08g061520.3.1 No alias Myosin-15 OS=Arabidopsis thaliana (sp|q0wpu1|myo15_arath : 724.0) 0.04 Archaeplastida
Zm00001e004513_P002 No alias class VIII myosin microfilament-based motor protein 0.03 Archaeplastida
Zm00001e006446_P002 No alias class XI myosin microfilament-based motor protein 0.04 Archaeplastida
Zm00001e010552_P001 No alias class VIII myosin microfilament-based motor protein 0.03 Archaeplastida
Zm00001e016227_P002 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
Zm00001e019983_P001 No alias class XI myosin microfilament-based motor protein 0.01 Archaeplastida
Zm00001e020540_P002 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
Zm00001e033368_P001 No alias class XI myosin microfilament-based motor protein 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:0070531 BRCA1-A complex IEP Neighborhood
CC GO:0070552 BRISC complex IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 270 289
IPR000048 IQ_motif_EF-hand-BS 222 241
IPR002710 Dilute_dom 802 905
IPR001609 Myosin_head_motor_dom 118 183
IPR001609 Myosin_head_motor_dom 1 117
No external refs found!