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  5. LOC_Os10g21110.1

LOC_Os10g21110.1


Description : no description available(sp|q680b7|xyn4_arath : 358.0)


Gene families : OG0001243 (Archaeplastida) Phylogenetic Tree(s): OG0001243_tree ,
OG_05_0000962 (LandPlants) Phylogenetic Tree(s): OG_05_0000962_tree ,
OG_06_0002114 (SeedPlants) Phylogenetic Tree(s): OG_06_0002114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g21110.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00056140 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT2G14690 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
GSVIVT01037825001 No alias No description available 0.05 Archaeplastida
GSVIVT01037832001 No alias No description available 0.02 Archaeplastida
GSVIVT01037833001 No alias No description available 0.03 Archaeplastida
Gb_02219 No alias no description available(sp|q84wt5|xyn5l_arath : 355.0) 0.03 Archaeplastida
LOC_Os03g10478.1 No alias no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.04 Archaeplastida
MA_10433351g0010 No alias no description available(sp|q84wt5|xyn5l_arath : 209.0) 0.04 Archaeplastida
Solyc01g106980.2.1 No alias No annotation 0.02 Archaeplastida
Zm00001e000757_P001 No alias no description available(sp|q84wt5|xyn5l_arath : 397.0) 0.02 Archaeplastida
Zm00001e002760_P001 No alias no description available(sp|q680b7|xyn4_arath : 360.0) 0.13 Archaeplastida
Zm00001e038773_P006 No alias no description available(sp|q84wt5|xyn5l_arath : 388.0) 0.02 Archaeplastida
Zm00001e040632_P001 No alias no description available(sp|q680b7|xyn4_arath : 318.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001000 GH10 227 462
No external refs found!