Description : component psRPL20 of large ribosomal subunit proteome
Gene families : OG0002485 (Archaeplastida) Phylogenetic Tree(s): OG0002485_tree ,
OG_05_0010199 (LandPlants) Phylogenetic Tree(s): OG_05_0010199_tree ,
OG_06_0009132 (SeedPlants) Phylogenetic Tree(s): OG_06_0009132_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os10g21314.1 | |
Cluster | HCCA: Cluster_82 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00660 | RPL20 | ribosomal protein L20 | 0.07 | Archaeplastida | |
LOC_Os08g15306.1 | No alias | component psRPL20 of large ribosomal subunit proteome | 0.12 | Archaeplastida | |
Solyc00g180440.1.1 | No alias | component psRPL20 of large ribosomal subunit proteome | 0.15 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
MF | GO:0019843 | rRNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006281 | DNA repair | IEP | Neighborhood |
BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
BP | GO:0006996 | organelle organization | IEP | Neighborhood |
MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
BP | GO:0009767 | photosynthetic electron transport chain | IEP | Neighborhood |
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
BP | GO:0019684 | photosynthesis, light reaction | IEP | Neighborhood |
BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
BP | GO:0032200 | telomere organization | IEP | Neighborhood |
BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
BP | GO:0065008 | regulation of biological quality | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005813 | Ribosomal_L20 | 3 | 108 |
No external refs found! |