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  5. LOC_Os10g21394.1

LOC_Os10g21394.1


Description : component NdhH of NDH subcomplex A


Gene families : OG0001064 (Archaeplastida) Phylogenetic Tree(s): OG0001064_tree ,
OG_05_0003898 (LandPlants) Phylogenetic Tree(s): OG_05_0003898_tree ,
OG_06_0003346 (SeedPlants) Phylogenetic Tree(s): OG_06_0003346_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g21394.1
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00084p00139550 evm_27.TU.AmTr_v1... NADH dehydrogenase [ubiquinone] iron-sulfur protein 2... 0.04 Archaeplastida
AMTR_s00140p00081000 evm_27.TU.AmTr_v1... NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.03 Archaeplastida
AMTR_s00456p00012010 evm_27.TU.AmTr_v1... NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.03 Archaeplastida
ATCG01110 NDHH NAD(P)H dehydrogenase subunit H 0.06 Archaeplastida
ATMG00510 NAD7 NADH dehydrogenase subunit 7 0.02 Archaeplastida
GSVIVT01012613001 No alias NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.02 Archaeplastida
Gb_17127 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp2g04290.1 No alias NADH dehydrogenase [ubiquinone] iron-sulfur protein 2... 0.02 Archaeplastida
Mp2g04300.1 No alias NADH dehydrogenase [ubiquinone] iron-sulfur protein 2... 0.02 Archaeplastida
Solyc00g500087.1.1 No alias component NdhH of NDH subcomplex A 0.07 Archaeplastida
Solyc00g500124.1.1 No alias component NdhH of NDH subcomplex A 0.07 Archaeplastida
Solyc00g500192.1.1 No alias component NdhH of NDH subcomplex A 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEA Interproscan
MF GO:0048038 quinone binding IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001135 NADH_Q_OxRdtase_suD 124 392
No external refs found!