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  5. LOC_Os10g21940.1

LOC_Os10g21940.1


Description : no hits & (original description: none)


Gene families : OG0000920 (Archaeplastida) Phylogenetic Tree(s): OG0000920_tree ,
OG_05_0000667 (LandPlants) Phylogenetic Tree(s): OG_05_0000667_tree ,
OG_06_0003696 (SeedPlants) Phylogenetic Tree(s): OG_06_0003696_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g21940.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257000 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G22060 No alias LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;... 0.12 Archaeplastida
AT5G41140 No alias Myosin heavy chain-related protein 0.09 Archaeplastida
AT5G52280 No alias Myosin heavy chain-related protein 0.03 Archaeplastida
GSVIVT01008970001 No alias No description available 0.1 Archaeplastida
GSVIVT01008971001 No alias No description available 0.08 Archaeplastida
GSVIVT01019782001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01028978001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_04459 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_23357 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os10g39950.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10431386g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10437003g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_123836g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_123836g0030 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_180303g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_9751268g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp4g12160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c14_25480V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c17_1340V3.1 No alias No annotation 0.03 Archaeplastida
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc04g072630.4.1 No alias no hits & (original description: none) 0.13 Archaeplastida
Solyc08g007970.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g080780.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e000062_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e004411_P002 No alias no hits & (original description: none) 0.16 Archaeplastida
Zm00001e012583_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e018560_P002 No alias no hits & (original description: none) 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0048365 Rac GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR019448 NT-C2 83 199
No external refs found!