AMTR_s00010p00225250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.249

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000097 (Archaeplastida) Phylogenetic Tree(s): OG0000097_tree ,
OG_05_0000048 (LandPlants) Phylogenetic Tree(s): OG_05_0000048_tree ,
OG_06_0000021 (SeedPlants) Phylogenetic Tree(s): OG_06_0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00225250
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.02 Archaeplastida
GSVIVT01036787001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
Gb_03682 No alias transcription factor (mTERF) 0.02 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.02 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_26175 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os04g54510.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_192398g0010 No alias transcription factor (mTERF) 0.05 Archaeplastida
MA_3151g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_508g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072550.3.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003690 MTERF 33 221
IPR003690 MTERF 198 292
No external refs found!