1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os10g23050.1

LOC_Os10g23050.1


Description : transcription factor (bHLH)


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0000646 (SeedPlants) Phylogenetic Tree(s): OG_06_0000646_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g23050.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00089p00043950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G72210 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT3G24140 FMA basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT5G46690 bHLH071 beta HLH protein 71 0.04 Archaeplastida
GSVIVT01017892001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_34544 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os06g33450.2 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_120602g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_57244g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc03g007410.4.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc05g053660.3.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc09g091760.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g087850.3.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e015494_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e026696_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 109 160
No external refs found!