LOC_Os10g26500.1

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0065348 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g26500.1
Cluster	HCCA: Cluster_195

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00235500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
AT1G26960	AtHB23, HB23	homeobox protein 23	0.03	Archaeplastida
AT3G01220	ATHB20, HB20	homeobox protein 20	0.08	Archaeplastida
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.03	Archaeplastida
AT4G36740	ATHB40, HB40, HB-5	homeobox protein 40	0.05	Archaeplastida
AT5G15150	ATHB3, HB-3, ATHB-3, HAT7	homeobox 3	0.03	Archaeplastida
AT5G53980	ATHB52, HB52	homeobox protein 52	0.05	Archaeplastida
AT5G65310	ATHB5, ATHB-5, HB5	homeobox protein 5	0.06	Archaeplastida
AT5G66700	ATHB53, HB53, HB-8	homeobox 53	0.02	Archaeplastida
GSVIVT01009083001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01019655001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
GSVIVT01020033001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
Gb_04698	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Gb_35959	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os02g49700.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
LOC_Os03g08960.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
LOC_Os03g10210.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
LOC_Os09g35910.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
MA_10428916g0010	No alias	transcription factor (HD-ZIP I/II)	0.06	Archaeplastida
MA_12053g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
MA_19453g0050	No alias	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis...	0.04	Archaeplastida
MA_3951g0010	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Mp3g02320.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Pp3c11_23440V3.1	No alias	homeobox 1	0.06	Archaeplastida
Pp3c17_18190V3.1	No alias	homeobox protein 16	0.05	Archaeplastida
Pp3c1_36940V3.1	No alias	homeobox protein 16	0.02	Archaeplastida
Pp3c1_37070V3.1	No alias	homeobox protein 16	0.07	Archaeplastida
Pp3c25_13450V3.1	No alias	homeobox 1	0.02	Archaeplastida
Pp3c2_4940V3.1	No alias	Homeobox-leucine zipper protein family	0.04	Archaeplastida
Pp3c6_2730V3.1	No alias	Homeobox-leucine zipper protein family	0.04	Archaeplastida
Pp3c7_2100V3.1	No alias	Homeobox-leucine zipper protein family	0.09	Archaeplastida
Pp3c8_440V3.1	No alias	homeobox 3	0.02	Archaeplastida
Solyc01g010600.4.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc02g067410.2.1	No alias	transcription factor (HD-ZIP I/II)	0.1	Archaeplastida
Solyc02g077590.1.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Solyc03g082550.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc04g005800.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc04g074700.4.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc05g051460.3.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Solyc06g053220.3.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Solyc09g008810.3.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Zm00001e002803_P001	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Zm00001e004824_P001	No alias	transcription factor (HD-ZIP I/II)	0.12	Archaeplastida
Zm00001e010004_P002	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Zm00001e012829_P001	No alias	transcription factor (HD-ZIP I/II)	0.1	Archaeplastida
Zm00001e038901_P001	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e041342_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
BP	GO:0001932	regulation of protein phosphorylation	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
MF	GO:0019900	kinase binding	IEP	Neighborhood
MF	GO:0019901	protein kinase binding	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042325	regulation of phosphorylation	IEP	Neighborhood
BP	GO:0043549	regulation of kinase activity	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Neighborhood
BP	GO:0045859	regulation of protein kinase activity	IEP	Neighborhood
CC	GO:0046658	anchored component of plasma membrane	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051338	regulation of transferase activity	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Neighborhood
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	163	202
IPR001356	Homeobox_dom	108	161

External Links

No external refs found!

LOC_Os10g26500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation