1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os10g29260.1

LOC_Os10g29260.1


Description : BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana (sp|q8l765|bpm1_arath : 204.0)


Gene families : OG0000128 (Archaeplastida) Phylogenetic Tree(s): OG0000128_tree ,
OG_05_0003305 (LandPlants) Phylogenetic Tree(s): OG_05_0003305_tree ,
OG_06_0003636 (SeedPlants) Phylogenetic Tree(s): OG_06_0003636_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g29260.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g20690.1 No alias BTB/POZ and MATH domain-containing protein 2... 0.06 Archaeplastida
LOC_Os08g03510.1 No alias BTB/POZ and MATH domain-containing protein 2... 0.03 Archaeplastida
LOC_Os10g29370.1 No alias BTB/POZ and MATH domain-containing protein 2... 0.05 Archaeplastida
LOC_Os10g29380.1 No alias BTB/POZ and MATH domain-containing protein 3... 0.06 Archaeplastida
Mp6g14350.1 No alias BTB/POZ and MATH domain-containing protein 4... 0.02 Archaeplastida
Zm00001e003615_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030370_P001 No alias BTB/POZ and MATH domain-containing protein 2... 0.03 Archaeplastida
Zm00001e030372_P002 No alias BTB/POZ and MATH domain-containing protein 1... 0.03 Archaeplastida
Zm00001e033378_P002 No alias BTB/POZ and MATH domain-containing protein 2... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 121 231
No external refs found!