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  5. LOC_Os10g29380.1

LOC_Os10g29380.1


Description : BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana (sp|o22286|bpm3_arath : 215.0)


Gene families : OG0000128 (Archaeplastida) Phylogenetic Tree(s): OG0000128_tree ,
OG_05_0003305 (LandPlants) Phylogenetic Tree(s): OG_05_0003305_tree ,
OG_06_0003636 (SeedPlants) Phylogenetic Tree(s): OG_06_0003636_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g29380.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g45730.1 No alias BTB/POZ and MATH domain-containing protein 1... 0.03 Archaeplastida
LOC_Os08g41190.1 No alias BTB/POZ and MATH domain-containing protein 1... 0.04 Archaeplastida
LOC_Os08g41200.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g29180.1 No alias BTB/POZ and MATH domain-containing protein 1... 0.05 Archaeplastida
LOC_Os10g29260.1 No alias BTB/POZ and MATH domain-containing protein 1... 0.06 Archaeplastida
LOC_Os10g29320.1 No alias BTB/POZ and MATH domain-containing protein 1... 0.06 Archaeplastida
LOC_Os11g45560.1 No alias BTB/POZ and MATH domain-containing protein 1... 0.06 Archaeplastida
Zm00001e003615_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e005040_P001 No alias BTB/POZ and MATH domain-containing protein 2... 0.04 Archaeplastida
Zm00001e006483_P001 No alias BTB/POZ and MATH domain-containing protein 1... 0.03 Archaeplastida
Zm00001e030370_P001 No alias BTB/POZ and MATH domain-containing protein 2... 0.03 Archaeplastida
Zm00001e030371_P001 No alias BTB/POZ and MATH domain-containing protein 1... 0.04 Archaeplastida
Zm00001e030372_P002 No alias BTB/POZ and MATH domain-containing protein 1... 0.03 Archaeplastida
Zm00001e033378_P002 No alias BTB/POZ and MATH domain-containing protein 2... 0.04 Archaeplastida
Zm00001e035646_P001 No alias BTB/POZ and MATH domain-containing protein 1... 0.04 Archaeplastida
Zm00001e039614_P001 No alias BTB/POZ and MATH domain-containing protein 1... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 188 301
IPR002083 MATH/TRAF_dom 49 153
No external refs found!