1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os10g29660.2

LOC_Os10g29660.2


Description : protein (TBP) component TATA-box-binding of TFIId basal transcription regulation complex. TATA-box-binding protein of RNA polymerase III-dependent transcription


Gene families : OG0001939 (Archaeplastida) Phylogenetic Tree(s): OG0001939_tree ,
OG_05_0002908 (LandPlants) Phylogenetic Tree(s): OG_05_0002908_tree ,
OG_06_0002748 (SeedPlants) Phylogenetic Tree(s): OG_06_0002748_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g29660.2
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT1G55520 ATTBP2, TBP2 TATA binding protein 2 0.02 Archaeplastida
Cpa|evm.model.tig00000093.115 No alias TATA-box-binding protein OS=Glycine max 0.01 Archaeplastida
Cpa|evm.model.tig00000093.194 No alias TATA-box-binding protein OS=Glycine max 0.01 Archaeplastida
GSVIVT01025497001 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.03 Archaeplastida
Smo270329 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000814 TBP 46 120
No external refs found!