LOC_Os10g30850.1


Description : RING-HC-class E3 ligase


Gene families : OG0001188 (Archaeplastida) Phylogenetic Tree(s): OG0001188_tree ,
OG_05_0017933 (LandPlants) Phylogenetic Tree(s): OG_05_0017933_tree ,
OG_06_0017492 (SeedPlants) Phylogenetic Tree(s): OG_06_0017492_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g30850.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT3G47160 No alias RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01002021001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01024747001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
GSVIVT01033965001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
MA_20567g0010 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Solyc02g078460.3.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Zm00001e004453_P001 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Zm00001e004685_P002 No alias RING-HC-class E3 ligase 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 148 187
No external refs found!