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  5. LOC_Os10g31040.3

LOC_Os10g31040.3


Description : putative silicon efflux transporter (LSI2)


Gene families : OG0001845 (Archaeplastida) Phylogenetic Tree(s): OG0001845_tree ,
OG_05_0001690 (LandPlants) Phylogenetic Tree(s): OG_05_0001690_tree ,
OG_06_0003853 (SeedPlants) Phylogenetic Tree(s): OG_06_0003853_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g31040.3
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028896001 No alias Solute transport.carrier-mediated transport.IT... 0.03 Archaeplastida
Gb_28693 No alias putative silicon efflux transporter (LSI2) 0.03 Archaeplastida
Zm00001e000055_P001 No alias putative silicon efflux transporter (LSI2) 0.02 Archaeplastida
Zm00001e002282_P001 No alias putative silicon efflux transporter (LSI2) 0.02 Archaeplastida
Zm00001e023569_P001 No alias putative silicon efflux transporter (LSI2) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 29 512
No external refs found!