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  5. LOC_Os10g32970.1

LOC_Os10g32970.1


Description : component eIF-iso4E of eIF-iso4F unwinding complex


Gene families : OG0001900 (Archaeplastida) Phylogenetic Tree(s): OG0001900_tree ,
OG_05_0001753 (LandPlants) Phylogenetic Tree(s): OG_05_0001753_tree ,
OG_06_0002228 (SeedPlants) Phylogenetic Tree(s): OG_06_0002228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g32970.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Mp1g06030.1 No alias component eIF4E of eIF4F mRNA unwinding complex.... 0.04 Archaeplastida
Pp3c2_32310V3.1 No alias eukaryotic translation initiation factor 4E 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 32 186
No external refs found!