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  5. LOC_Os10g35230.1

LOC_Os10g35230.1


Description : Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica (sp|q76c99|rf1_orysi : 733.0)


Gene families : OG0001482 (Archaeplastida) Phylogenetic Tree(s): OG0001482_tree ,
OG_05_0000870 (LandPlants) Phylogenetic Tree(s): OG_05_0000870_tree ,
OG_06_0000537 (SeedPlants) Phylogenetic Tree(s): OG_06_0000537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g35230.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Smo90583 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
BP GO:0007088 regulation of mitotic nuclear division IEP Neighborhood
BP GO:0007346 regulation of mitotic cell cycle IEP Neighborhood
BP GO:0010564 regulation of cell cycle process IEP Neighborhood
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Neighborhood
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0033045 regulation of sister chromatid segregation IEP Neighborhood
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0051783 regulation of nuclear division IEP Neighborhood
BP GO:0051983 regulation of chromosome segregation IEP Neighborhood
BP GO:1901987 regulation of cell cycle phase transition IEP Neighborhood
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Neighborhood
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1905818 regulation of chromosome separation IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 120 167
IPR002885 Pentatricopeptide_repeat 190 239
IPR002885 Pentatricopeptide_repeat 365 414
IPR002885 Pentatricopeptide_repeat 295 343
IPR002885 Pentatricopeptide_repeat 256 288
IPR002885 Pentatricopeptide_repeat 80 101
IPR002885 Pentatricopeptide_repeat 432 459
No external refs found!