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Description : Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica (sp|q76c99|rf1_orysi : 1363.0)
Gene families : OG0001482 (Archaeplastida) Phylogenetic Tree(s): OG0001482_tree ,
OG_05_0000870 (LandPlants) Phylogenetic Tree(s): OG_05_0000870_tree ,
OG_06_0000537 (SeedPlants) Phylogenetic Tree(s): OG_06_0000537_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os10g35436.1 | |
| Cluster | HCCA: Cluster_151 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Zm00001e011263_P001 | No alias | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... | 0.02 | Archaeplastida | |
| Zm00001e011267_P001 | No alias | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... | 0.02 | Archaeplastida | |
| Zm00001e026658_P003 | No alias | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... | 0.02 | Archaeplastida | |
| Zm00001e026660_P001 | No alias | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0010215 | cellulose microfibril organization | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0030198 | extracellular matrix organization | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| CC | GO:0031225 | anchored component of membrane | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
| BP | GO:0043062 | extracellular structure organization | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 368 | 401 |
| IPR002885 | Pentatricopeptide_repeat | 157 | 188 |
| IPR002885 | Pentatricopeptide_repeat | 509 | 540 |
| IPR002885 | Pentatricopeptide_repeat | 619 | 642 |
| IPR002885 | Pentatricopeptide_repeat | 263 | 295 |
| IPR002885 | Pentatricopeptide_repeat | 473 | 506 |
| IPR002885 | Pentatricopeptide_repeat | 655 | 695 |
| IPR002885 | Pentatricopeptide_repeat | 547 | 594 |
| IPR002885 | Pentatricopeptide_repeat | 197 | 246 |
| IPR002885 | Pentatricopeptide_repeat | 407 | 455 |
| IPR002885 | Pentatricopeptide_repeat | 302 | 350 |
| IPR002885 | Pentatricopeptide_repeat | 93 | 121 |
| No external refs found! |