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  5. LOC_Os10g35730.1

LOC_Os10g35730.1


Description : Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana (sp|q9sy07|pp302_arath : 129.0)


Gene families : OG0000235 (Archaeplastida) Phylogenetic Tree(s): OG0000235_tree ,
OG_05_0000298 (LandPlants) Phylogenetic Tree(s): OG_05_0000298_tree ,
OG_06_0003159 (SeedPlants) Phylogenetic Tree(s): OG_06_0003159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g35730.1
Cluster HCCA: Cluster_345

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00181820 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
AMTR_s00135p00094440 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g09450,... 0.03 Archaeplastida
AT1G15480 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Archaeplastida
AT3G15590 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 Archaeplastida
GSVIVT01020533001 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.03 Archaeplastida
GSVIVT01020534001 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.04 Archaeplastida
Gb_03507 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.04 Archaeplastida
Gb_09452 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.04 Archaeplastida
Gb_20238 No alias RNA editing factor (POCO) 0.02 Archaeplastida
LOC_Os02g55310.1 No alias Pentatricopeptide repeat-containing protein At5g27460... 0.11 Archaeplastida
MA_10431989g0010 No alias RNA editing factor (POCO) 0.02 Archaeplastida
MA_10435629g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
MA_128872g0020 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 Archaeplastida
MA_170161g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
MA_29806g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
MA_492314g0010 No alias RNA editing factor (POCO) 0.02 Archaeplastida
MA_87771g0010 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.04 Archaeplastida
MA_9997953g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
Smo406783 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.02 Archaeplastida
Smo412643 No alias Pentatricopeptide repeat-containing protein At1g07590,... 0.04 Archaeplastida
Smo413483 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.05 Archaeplastida
Smo421992 No alias Pentatricopeptide repeat-containing protein At3g15590,... 0.02 Archaeplastida
Smo444770 No alias Pentatricopeptide repeat-containing protein At3g15590,... 0.01 Archaeplastida
Solyc01g079320.4.1 No alias Pentatricopeptide repeat-containing protein At1g02370,... 0.03 Archaeplastida
Solyc01g081320.4.1 No alias Pentatricopeptide repeat-containing protein At5g27460... 0.02 Archaeplastida
Solyc02g078330.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 Archaeplastida
Solyc07g054090.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 Archaeplastida
Solyc07g063220.4.1 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 Archaeplastida
Zm00001e012594_P001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.05 Archaeplastida
Zm00001e040185_P001 No alias Pentatricopeptide repeat-containing protein At1g07590,... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 48 76
IPR002885 Pentatricopeptide_repeat 194 220
IPR002885 Pentatricopeptide_repeat 82 111
No external refs found!