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  5. LOC_Os10g37830.1

LOC_Os10g37830.1


Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000968 (SeedPlants) Phylogenetic Tree(s): OG_06_0000968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g37830.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AT2G02230 AtPP2-B1, PP2-B1 phloem protein 2-B1 0.03 Archaeplastida
AT3G61060 AtPP2-A13, PP2-A13 phloem protein 2-A13 0.02 Archaeplastida
AT4G19840 PP2-A1,... phloem protein 2-A1 0.02 Archaeplastida
GSVIVT01012084001 No alias Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_16253 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc01g100000.3.1 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g106110.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g031750.3.1 No alias Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g069020.3.1 No alias Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g069040.4.1 No alias Lectin OS=Luffa acutangula (sp|c0hjv2|lec_lufac : 91.7) 0.02 Archaeplastida
Solyc10g017960.2.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.06 Archaeplastida
Zm00001e016195_P001 No alias F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 136 294
No external refs found!