LOC_Os10g38000.1

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g38000.1
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00007p00268280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00107p00095070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00115p00032780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G12890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.02	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G71450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G07580	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G11190	SHN3	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.03	Archaeplastida
AT5G61600	ERF104	ethylene response factor 104	0.05	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.02	Archaeplastida
GSVIVT01001089001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01006277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01008649001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01013913001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013917001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013918001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013923001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01014291001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031747001	No alias	Alpha-amylase type B isozyme OS=Hordeum vulgare	0.03	Archaeplastida
GSVIVT01032983001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01033416001	No alias	External stimuli response.biotic...	0.03	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_08437	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_15343	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_24048	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_26067	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os01g73770.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os03g08500.2	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os03g22170.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g44670.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g46440.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os06g09760.1	No alias	Ethylene-responsive transcription factor ERF018...	0.06	Archaeplastida
LOC_Os06g11940.1	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
LOC_Os07g22770.1	No alias	no description available(sp\|a0a3q7i5y9\|erfc3_sollc : 90.1)	0.04	Archaeplastida
LOC_Os08g07700.1	No alias	Ethylene-responsive transcription factor ERF087...	0.03	Archaeplastida
LOC_Os08g35240.1	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10432141g0020	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
MA_10432800g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10434101g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10434489g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_135279g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_27309g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_40048g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_4032g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_426919g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_484878g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_8384767g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
Mp5g22160.1	No alias	Ethylene-responsive transcription factor ERF112...	0.02	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.02	Archaeplastida
Pp3c5_880V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c9_2020V3.1	No alias	erf domain protein 9	0.02	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g009440.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.03	Archaeplastida
Solyc02g093130.3.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc03g005510.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g026280.3.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.03	Archaeplastida
Solyc03g114440.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc04g072900.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g052040.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc07g053740.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc08g078190.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g009110.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc11g006050.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e001139_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.02	Archaeplastida
Zm00001e002151_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e002789_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e006982_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e013927_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e014413_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e015312_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e015327_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e018522_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e024669_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e025064_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e029041_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e030585_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.03	Archaeplastida
Zm00001e036437_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Zm00001e038819_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e040879_P001	No alias	Ethylene-responsive transcription factor RAP2-6...	0.02	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e041815_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Neighborhood
CC	GO:0005681	spliceosomal complex	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	34	83

External Links

No external refs found!

LOC_Os10g38000.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation