LOC_Os10g39030.1

Description : transcription factor (BEL)

Gene families : OG0000236 (Archaeplastida) Phylogenetic Tree(s): OG0000236_tree ,
OG_05_0000141 (LandPlants) Phylogenetic Tree(s): OG_05_0000141_tree ,
OG_06_0001991 (SeedPlants) Phylogenetic Tree(s): OG_06_0001991_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g39030.1
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00262320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AMTR_s00002p00243900	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
AMTR_s00059p00164750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AMTR_s00165p00052010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
AT1G19700	BEL10, BLH10	BEL1-like homeodomain 10	0.05	Archaeplastida
AT1G75410	BLH3	BEL1-like homeodomain 3	0.03	Archaeplastida
AT2G35940	EDA29, BLH1	BEL1-like homeodomain 1	0.04	Archaeplastida
AT4G36870	BLH2, SAW1	BEL1-like homeodomain 2	0.04	Archaeplastida
AT5G02030	VAN, BLH9, RPL,...	POX (plant homeobox) family protein	0.03	Archaeplastida
GSVIVT01009633001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.07	Archaeplastida
GSVIVT01011146001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01016458001	No alias	Solute transport.carrier-mediated transport.MFS...	0.02	Archaeplastida
GSVIVT01019043001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01019399001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
GSVIVT01024224001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01025220001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01034073001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01037575001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
Gb_15916	No alias	transcription factor (BEL)	0.04	Archaeplastida
Gb_22513	No alias	transcription factor (BEL)	0.03	Archaeplastida
Gb_36166	No alias	transcription factor (BEL)	0.03	Archaeplastida
Gb_39741	No alias	transcription factor (BEL)	0.03	Archaeplastida
LOC_Os06g01934.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
MA_111188g0010	No alias	transcription factor (BEL)	0.02	Archaeplastida
MA_6763g0010	No alias	transcription factor (BEL)	0.04	Archaeplastida
Mp5g11060.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Mp8g18310.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
Pp3c13_7150V3.1	No alias	BEL1-like homeodomain 6	0.02	Archaeplastida
Pp3c15_11880V3.1	No alias	BEL1-like homeodomain 7	0.03	Archaeplastida
Solyc02g065490.4.1	No alias	transcription factor (BEL)	0.04	Archaeplastida
Solyc04g079830.2.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Solyc08g081400.4.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Solyc10g086640.3.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Solyc11g068950.3.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e000177_P001	No alias	transcription factor (BEL)	0.07	Archaeplastida
Zm00001e000495_P001	No alias	transcription factor (BEL)	0.07	Archaeplastida
Zm00001e002206_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e003327_P001	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e005579_P001	No alias	transcription factor (BEL)	0.08	Archaeplastida
Zm00001e024626_P004	No alias	transcription factor (BEL)	0.1	Archaeplastida
Zm00001e026923_P002	No alias	transcription factor (BEL)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003830	beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006487	protein N-linked glycosylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Neighborhood
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006563	POX_dom	146	273
IPR008422	Homeobox_KN_domain	342	381

External Links

No external refs found!

LOC_Os10g39030.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation