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  5. LOC_Os10g39210.1

LOC_Os10g39210.1


Description : Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana (sp|f4iqg4|hip30_arath : 145.0)


Gene families : OG0000049 (Archaeplastida) Phylogenetic Tree(s): OG0000049_tree ,
OG_05_0000107 (LandPlants) Phylogenetic Tree(s): OG_05_0000107_tree ,
OG_06_0006074 (SeedPlants) Phylogenetic Tree(s): OG_06_0006074_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g39210.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00268350 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 37... 0.03 Archaeplastida
AMTR_s00025p00083640 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 32... 0.03 Archaeplastida
AMTR_s00034p00190630 evm_27.TU.AmTr_v1... Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT3G06130 No alias Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
AT3G48970 No alias Heavy metal transport/detoxification superfamily protein 0.06 Archaeplastida
AT3G56240 CCH copper chaperone 0.03 Archaeplastida
AT4G23882 No alias Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
AT5G37860 No alias Heavy metal transport/detoxification superfamily protein 0.04 Archaeplastida
AT5G66110 HIPP27 Heavy metal transport/detoxification superfamily protein 0.04 Archaeplastida
GSVIVT01000021001 No alias Heavy metal-associated isoprenylated plant protein 32... 0.02 Archaeplastida
GSVIVT01018723001 No alias Heavy metal-associated isoprenylated plant protein 27... 0.02 Archaeplastida
GSVIVT01018725001 No alias Heavy metal-associated isoprenylated plant protein 27... 0.02 Archaeplastida
GSVIVT01027966001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.07 Archaeplastida
GSVIVT01030880001 No alias Heavy metal-associated isoprenylated plant protein 37... 0.02 Archaeplastida
GSVIVT01030883001 No alias Heavy metal-associated isoprenylated plant protein 21... 0.04 Archaeplastida
Gb_20919 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 Archaeplastida
Gb_31193 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.02 Archaeplastida
Gb_38910 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_39768 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g41200.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g32814.1 No alias copper chaperone (CCH) 0.04 Archaeplastida
LOC_Os07g47480.2 No alias Heavy metal-associated isoprenylated plant protein 36... 0.03 Archaeplastida
MA_11775g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 Archaeplastida
MA_131067g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_165810g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.02 Archaeplastida
Mp2g25230.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp5g20370.1 No alias copper chaperone (CCH) 0.03 Archaeplastida
Mp8g01830.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c11_7800V3.1 No alias Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
Solyc01g105000.3.1 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g076880.4.1 No alias Heavy metal-associated isoprenylated plant protein 28... 0.04 Archaeplastida
Solyc05g051820.3.1 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 Archaeplastida
Zm00001e003565_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e004204_P001 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 Archaeplastida
Zm00001e027825_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e035823_P003 No alias Heavy metal-associated isoprenylated plant protein 36... 0.04 Archaeplastida
Zm00001e037128_P001 No alias Heavy metal-associated isoprenylated plant protein 28... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006121 HMA_dom 58 113
No external refs found!