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  5. LOC_Os10g39750.1

LOC_Os10g39750.1


Description : transcription factor (bHLH)


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0003886 (LandPlants) Phylogenetic Tree(s): OG_05_0003886_tree ,
OG_06_0002813 (SeedPlants) Phylogenetic Tree(s): OG_06_0002813_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g39750.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01004405001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01009234001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01013744001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01013745001 No alias Transcription factor bHLH90 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01024008001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01032998001 No alias External stimuli response.temperature.ICE-CBF cold... 0.03 Archaeplastida
Gb_05276 No alias transcription factor (bHLH) 0.05 Archaeplastida
Gb_15579 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os02g02820.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os11g32100.1 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.05 Archaeplastida
MA_20585g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.04 Archaeplastida
MA_439607g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_89559g0020 No alias Transcription factor ABORTED MICROSPORES OS=Arabidopsis... 0.03 Archaeplastida
Mp2g02460.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c1_20960V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c3_15850V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c8_18070V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Solyc02g079810.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc05g005300.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc05g014590.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc06g051550.4.1 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.03 Archaeplastida
Solyc08g062780.2.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e025243_P003 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 199 241
No external refs found!