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  5. LOC_Os10g40020.3

LOC_Os10g40020.3


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum (sp|q6rvv4|tic32_pea : 318.0)


Gene families : OG0000289 (Archaeplastida) Phylogenetic Tree(s): OG0000289_tree ,
OG_05_0000631 (LandPlants) Phylogenetic Tree(s): OG_05_0000631_tree ,
OG_06_0022081 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g40020.3
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT4G11410 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
AT5G50130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
GSVIVT01025521001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.03 Archaeplastida
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 Archaeplastida
LOC_Os11g07922.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
LOC_Os11g07930.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida
MA_125991g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 Archaeplastida
MA_265629g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_61875g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.01 Archaeplastida
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
Smo439201 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.03 Archaeplastida
Smo85319 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
Solyc03g025410.4.1 No alias component Tic32 of inner envelope TIC translocation system 0.02 Archaeplastida
Solyc06g071610.3.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
Solyc08g081200.3.1 No alias component Tic32 of inner envelope TIC translocation system 0.03 Archaeplastida
Zm00001e036623_P001 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006559 L-phenylalanine catabolic process IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 31 239
No external refs found!